Update Algorithm.md
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@ -7,7 +7,7 @@ For an edge-weighted graph, a _maximum weight matching_ is a matching that achie
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the largest possible sum of weights of matched edges.
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the largest possible sum of weights of matched edges.
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The code in this repository is based on a variant of the blossom algorithm that runs in
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The code in this repository is based on a variant of the blossom algorithm that runs in
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_O(n \* m \* log(n))_ steps.
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_O(n m log n)_ steps.
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See the file [Algorithm.md](doc/Algorithm.md) for a detailed description.
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See the file [Algorithm.md](doc/Algorithm.md) for a detailed description.
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@ -44,7 +44,7 @@ The folder [cpp/](cpp/) contains a header-only C++ implementation of maximum wei
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**NOTE:**
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**NOTE:**
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The C++ code currently implements a slower algorithm that runs in _O(n<sup>3</sup>)_ steps.
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The C++ code currently implements a slower algorithm that runs in _O(n<sup>3</sup>)_ steps.
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I plan to eventually update the C++ code to implement the faster _O(n*m*log(n))_ algorithm.
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I plan to eventually update the C++ code to implement the faster _O(n m log n)_ algorithm.
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The C++ code is self-contained and can easily be linked into an application.
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The C++ code is self-contained and can easily be linked into an application.
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It is also reasonably efficient.
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It is also reasonably efficient.
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743
doc/Algorithm.md
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doc/Algorithm.md
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@ -4,19 +4,20 @@
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## Introduction
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## Introduction
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This document describes the implementation of an algorithm that computes a maximum weight matching
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This document describes the implementation of an algorithm that computes a maximum weight matching
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in a general graph in time _O(n<sup>3</sup>)_, where _n_ is the number of vertices in the graph.
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in a general graph in time _O(n (n + m) log n)_, where _n_ is the number of vertices in
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the graph and _m_ is the number of edges.
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In graph theory, a _matching_ is a subset of edges such that none of them share a common vertex.
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In graph theory, a _matching_ is a subset of edges such that none of them share a common vertex.
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A _maximum cardinality matching_ is a matching that contains the largest possible number of edges
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A _maximum cardinality matching_ is a matching that contains the largest possible number of edges
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(or equivalently, the largest possible number of vertices).
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(or equivalently, the largest possible number of vertices).
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For a graph that has weights attached to its edges, a _maximum weight matching_
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If a graph has weights assigned to its edges, a _maximum weight matching_
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is a matching that achieves the largest possible sum of weights of matched edges.
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is a matching that achieves the largest possible sum of weights of matched edges.
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An algorithm for maximum weight matching can obviously also be used to calculate a maximum
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An algorithm for maximum weight matching can obviously also be used to calculate a maximum
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cardinality matching by simply assigning weight 1 to all edges.
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cardinality matching by simply assigning weight 1 to all edges.
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Certain computer science problems can be understood as _restrictions_ of maximum weighted matching
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Certain related problems can be understood as _restrictions_ of maximum weighted matching
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in general graphs.
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in general graphs.
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Examples are: maximum matching in bipartite graphs, maximum cardinality matching in general graphs,
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Examples are: maximum matching in bipartite graphs, maximum cardinality matching in general graphs,
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and maximum weighted matching in general graphs with edge weights limited to integers
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and maximum weighted matching in general graphs with edge weights limited to integers
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@ -48,7 +49,7 @@ It is based on the ideas of Edmonds, but uses different data structures to reduc
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of work.
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of work.
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In 1983, Galil, Micali and Gabow published a maximum weighted matching algorithm that runs in
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In 1983, Galil, Micali and Gabow published a maximum weighted matching algorithm that runs in
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time _O(n\*m\*log(n))_ [[4]](#galil_micali_gabow1986) .
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time _O(n m log n)_ [[4]](#galil_micali_gabow1986) .
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It is an implementation of Edmonds' blossom algorithm that uses advanced data structures
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It is an implementation of Edmonds' blossom algorithm that uses advanced data structures
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to speed up critical parts of the algorithm.
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to speed up critical parts of the algorithm.
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This algorithm is asymptotically faster than _O(n<sup>3</sup>)_ for sparse graphs,
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This algorithm is asymptotically faster than _O(n<sup>3</sup>)_ for sparse graphs,
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@ -63,45 +64,32 @@ of the literature.
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The paper describes a maximum weighted matching algorithm that is similar to Edmonds'
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The paper describes a maximum weighted matching algorithm that is similar to Edmonds'
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blossom algorithm, but carefully implemented to run in time _O(n<sup>3</sup>)_.
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blossom algorithm, but carefully implemented to run in time _O(n<sup>3</sup>)_.
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It then sketches how advanced data structures can be added to arrive at the Galil-Micali-Gabow
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It then sketches how advanced data structures can be added to arrive at the Galil-Micali-Gabow
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algorithm that runs in time _O(n\*m\*log(n))_.
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algorithm that runs in time _O(n m log n)_.
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In 1990, Gabow published a maximum weighted matching algorithm that runs in time
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In 1990, Gabow published a maximum weighted matching algorithm that runs in time
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_O(n\*m + n<sup>2</sup>\*log(n))_ [[6]](#gabow1990) .
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_O(n m + n<sup>2</sup> log n)_ [[6]](#gabow1990) .
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It uses several advanced data structures, including Fibonacci heaps.
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It uses several advanced data structures, including Fibonacci heaps.
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Unfortunately I don't understand this algorithm at all.
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Unfortunately I don't understand this algorithm at all.
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## Choosing an algorithm
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## Choosing an algorithm
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I selected the _O(n<sup>3</sup>)_ variant of Edmonds' blossom algorithm as described by
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I selected the _O(n m log n)_ algorithm by Galil, Micali and Gabow
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Galil [[5]](#galil1986) .
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[[4]](#galil_micali_gabow1986).
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This algorithm is usually credited to Gabow [[3]](#gabow1974), but I find the description
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in [[5]](#galil1986) easier to understand.
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This is generally a fine algorithm.
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This algorithm is asymptotically optimal for sparse graphs.
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One of its strengths is that it is relatively easy to understand, especially compared
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It has also been shown to be quite fast in practice on several types of graphs
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to the more recent algorithms.
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including random graphs [[7]](#mehlhorn_schafer2002).
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Its run time is asymptotically optimal for complete graphs (graphs that have an edge
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between every pair of vertices).
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On the other hand, the algorithm is suboptimal for sparse graphs.
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It is possible to construct highly sparse graphs, having _m = O(n)_,
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that cause this algorithm to perform _Θ(n<sup>3</sup>)_ steps.
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In such cases the Galil-Micali-Gabow algorithm would be significantly faster.
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Then again, there is a question of how important the worst case is for practical applications.
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I suspect that the simple algorithm typically needs only about _O(n\*m)_ steps when running
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on random sparse graphs with random weights, i.e. much faster than its worst case bound.
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After trading off these properties, I decided that I prefer an algorithm that is understandable
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and has decent performance, over an algorithm that is faster in specific cases but also
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significantly more complicated.
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This algorithm is more difficult to implement than the older _O(n<sup>3</sup>)_ algorithm.
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In particular, it requires a specialized data structure to implement concatenable priority queues.
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This increases the size and complexity of the code quite a bit.
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However, in my opinion the performance improvement is worth the extra effort.
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## Description of the algorithm
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## Description of the algorithm
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My implementation closely follows the description by Zvi Galil in [[5]](#galil1986) .
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My implementation roughly follows the description by Zvi Galil in [[5]](#galil1986) .
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I recommend to read that paper before diving into my description below.
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I recommend reading that paper before diving into my description below.
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The paper explains the algorithm in depth and shows how it relates to matching
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The paper explains the algorithm in depth and shows how it relates to matching
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in bipartite graphs and non-weighted graphs.
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in bipartite graphs and non-weighted graphs.
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@ -253,14 +241,14 @@ have _slack_.
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An augmenting path that consists only of tight edges is _guaranteed_ to increase the weight
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An augmenting path that consists only of tight edges is _guaranteed_ to increase the weight
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of the matching as much as possible.
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of the matching as much as possible.
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While searching for an augmenting path, we simply restrict the search to tight edges,
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While searching for an augmenting path, we restrict the search to tight edges,
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ignoring all edges that have slack.
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ignoring all edges that have slack.
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Certain explicit actions of the algorithm cause edges to become tight or slack.
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Certain explicit actions of the algorithm cause edges to become tight or slack.
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How this works will be explained later.
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How this works will be explained later.
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To find an augmenting path, the algorithm searches for alternating paths that start
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To find an augmenting path, the algorithm searches for alternating paths that start
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in an unmatched vertex.
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in an unmatched vertex.
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The collection of alternating paths forms a forest of trees.
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The collection of such alternating paths forms a forest of trees.
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Each tree is rooted in an unmatched vertex, and all paths from the root to the leaves of a tree
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Each tree is rooted in an unmatched vertex, and all paths from the root to the leaves of a tree
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are alternating paths.
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are alternating paths.
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The nodes in these trees are top-level blossoms.
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The nodes in these trees are top-level blossoms.
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@ -289,8 +277,8 @@ an odd-length alternating cycle.
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The lowest common ancestor node in the alternating tree forms the beginning and end
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The lowest common ancestor node in the alternating tree forms the beginning and end
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of the alternating cycle.
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of the alternating cycle.
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In this case a new blossom must be created by shrinking the cycle.
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In this case a new blossom must be created by shrinking the cycle.
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If the two S-blossoms are in different alternating trees, the edge that links the blossoms
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On the other hand, if the two S-blossoms are in different alternating trees,
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is part of an augmenting path between the roots of the two trees.
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the edge that links the blossoms is part of an augmenting path between the roots of the two trees.
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![Figure 3](figures/graph3.png) <br>
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![Figure 3](figures/graph3.png) <br>
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*Figure 3: Growing alternating trees*
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*Figure 3: Growing alternating trees*
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@ -314,7 +302,7 @@ The search procedure considers these vertices one-by-one and tries to use them t
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either grow the alternating tree (thus adding new vertices to the queue),
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either grow the alternating tree (thus adding new vertices to the queue),
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or discover an augmenting path or a new blossom.
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or discover an augmenting path or a new blossom.
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In detail, the search for an augmenting path proceeds as follows:
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The search for an augmenting path proceeds as follows:
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- Mark all top-level blossoms as _unlabeled_.
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- Mark all top-level blossoms as _unlabeled_.
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- Initialize an empty queue _Q_.
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- Initialize an empty queue _Q_.
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@ -469,9 +457,9 @@ $$ \pi_{x,y} = u_x + u_y + \sum_{(x,y) \in B} z_B - w_{x,y} $$
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An edge is _tight_ if and only if its slack is zero.
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An edge is _tight_ if and only if its slack is zero.
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Given the values of the dual variables, it is very easy to calculate the slack of an edge
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Given the values of the dual variables, it is very easy to calculate the slack of an edge
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which is not contained in any blossom: simply add the duals of its incident vertices and
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which is not contained in any blossom: add the duals of its incident vertices and
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subtract the weight.
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subtract the weight.
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To check whether an edge is tight, simply compute its slack and check whether it is zero.
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To check whether an edge is tight, simply compute its slack and compare it to zero.
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Calculating the slack of an edge that is contained in one or more blossoms is a little tricky,
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Calculating the slack of an edge that is contained in one or more blossoms is a little tricky,
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but fortunately we don't need such calculations.
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but fortunately we don't need such calculations.
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@ -504,7 +492,7 @@ At that point the maximum weight matching has been found.
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When the matching algorithm is finished, the constraints can be checked to verify
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When the matching algorithm is finished, the constraints can be checked to verify
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that the matching is optimal.
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that the matching is optimal.
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This check is simpler and faster than the matching algorithm itself.
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This check is simpler and faster than the matching algorithm itself.
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It can therefore be a useful way to guard against bugs in the matching algorithm.
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It can therefore be a useful way to guard against bugs in the algorithm.
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### Rules for updating dual variables
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### Rules for updating dual variables
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- _z<sub>B</sub> ← z<sub>B</sub> − 2 * δ_ for every non-trivial T-blossom _B_
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- _z<sub>B</sub> ← z<sub>B</sub> − 2 * δ_ for every non-trivial T-blossom _B_
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Dual variables of unlabeled blossoms and their vertices remain unchanged.
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Dual variables of unlabeled blossoms and their vertices remain unchanged.
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Dual variables _z<sub>B</sub>_ of non-trivial sub-blossoms also remain changed;
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Dual variables _z<sub>B</sub>_ of non-trivial sub-blossoms also remain unchanged;
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only top-level blossoms have their _z<sub>B</sub>_ updated.
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only top-level blossoms have their _z<sub>B</sub>_ updated.
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Note that this update does not change the slack of edges that are either matched,
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Note that these rules ensure that no change occurs to the slack of any edge which is matched,
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or linked in the alternating tree, or contained in a blossom.
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or part of an alternating tree, or contained in a blossom.
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Such edges are tight and remain tight through the update.
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However, the update reduces the slack of edges between S blossoms and edges between S-blossoms
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However, the update reduces the slack of edges between S blossoms and edges between S-blossoms
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and unlabeled blossoms.
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and unlabeled blossoms.
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It may cause some of these edges to become tight, allowing them to be used
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It may cause some of these edges to become tight, allowing them to be used
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a T-blossom to become zero.
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a T-blossom to become zero.
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The next step is to expand that blossom.
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The next step is to expand that blossom.
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A dual update may find that _δ = 0_, implying that the dual variables don't change.
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### Discovering tight edges through delta steps
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A delta step may find that _δ = 0_, implying that the dual variables don't change.
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This can still be useful since all types of updates have side effects (adding an edge
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This can still be useful since all types of updates have side effects (adding an edge
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to an alternating tree, or expanding a blossom) that allow the algorithm to make progress.
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to an alternating tree, or expanding a blossom) that allow the algorithm to make progress.
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In fact, it is convenient to let the dual update mechanism drive the entire process of discovering
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tight edges and growing alternating trees.
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During a single _stage_, the algorithm may iterate several times between scanning tight edges and
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In my description of the search algorithm above, I stated that upon discovery of a tight edge
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updating dual variables.
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between a newly labeled S-vertex and an unlabeled vertex or a different S-blossom, the edge should
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These iterations are called _substages_.
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be used to grow the alternating tree or to create a new blossom or to form an augmenting path.
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To clarify: A stage is the process of growing alternating trees until an augmenting path is found.
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However, it turns out to be easier to postpone the use of such edges until the next delta step.
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While scanning newly labeled S-vertices, edges to unlabeled vertices or different S-blossoms
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are discovered but not yet used.
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Such edges are merely registered in a suitable data structure.
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Even if the edge is tight, it is registered rather than used right away.
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Once the scan completes, a delta step will be done.
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If any tight edges were discovered during the scan, the delta step will find that either
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_δ<sub>2</sub> = 0_ or _δ<sub>3</sub> = 0_.
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The corresponding step (growing the alternating tree, creating a blossom or augmenting
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the matching) will occur at that point.
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If no suitable tight edges exist, a real (non-zero) change of dual variables will occur.
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The search for an augmenting path becomes as follows:
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- Mark all top-level blossoms as _unlabeled_.
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- Initialize an empty queue _Q_.
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- Assign label S to all top-level blossoms that contain an unmatched vertex.
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Add all vertices inside such blossoms to _Q_.
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- Repeat until either an augmenting path is found or _δ<sub>1</sub> = 0_:
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- Scan all vertices in Q as described earlier.
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Register edges to unlabeled vertices or other S-blossoms.
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Do not yet use such edges to change the alternating tree, even if the edge is tight.
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- Calculate _δ_ and update dual variables as described above.
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- If _δ = δ<sub>1</sub>_, end the search.
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The maximum weight matching has been found.
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- If _δ = δ<sub>2</sub>_, use the corresponding edge to grow the alternating tree.
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Assign label T to the unlabeled blossom.
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Then assign label S to its mate and add the new S-vertices to _Q_.
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- If _δ = δ<sub>3</sub>_ and the corresponding edge connects two S-blossoms
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in the same alternating tree, use the edge to create a new blossom.
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Add the new S-vertices to _Q_.
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- If _δ = δ<sub>3</sub>_ and the corresponding edge connects two S-blossoms
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in different alternating trees, use the edge to construct an augmenting path.
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End the search and return the augmenting path.
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- If _δ = δ<sub>4</sub>_, expand the corresponding T-blossom.
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It may seem complicated, but this is actually easier.
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The code that scans newly labeled S-vertices, no longer needs special treatment of tight edges.
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In general, multiple updates of the dual variables are necessary during a single _stage_ of
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the algorithm.
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Remember that a stage is the process of growing alternating trees until an augmenting path is found.
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A stage ends either by augmenting the matching, or by concluding that no further improvement
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A stage ends either by augmenting the matching, or by concluding that no further improvement
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is possible.
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is possible.
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Each stage consists of one or more substages.
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A substage scans tight edges to grow the alternating trees.
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When a substage runs out of tight edges, it ends by performing a dual variable update.
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A substage also ends immediately when it finds an augmenting path.
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At the end of each stage, labels and alternating trees are removed.
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The matching algorithm ends when a substage ends in a dual variable update limited
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by _δ<sub>1</sub>_.
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At that point the matching has maximum weight.
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### Expanding a blossom
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### Expanding a blossom
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![Figure 5](figures/graph5.png) <br>
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![Figure 5](figures/graph5.png) <br>
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*Figure 5: Expanding a T-blossom*
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*Figure 5: Expanding a T-blossom*
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### Keeping track of least-slack edges
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### Keeping track of the top-level blossom of each vertex
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To perform a dual variable update, the algorithm needs to compute the values
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The algorithm often needs to find the top-level blossom _B(x)_ that contains a given vertex _x_.
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A naive implementation may keep this information in an array where the element with
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index _x_ holds a pointer to blossom _B(x)_.
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Lookup in this array would be fast, but keeping the array up-to-date takes too much time.
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There can be _O(n)_ stages, and _O(n)_ blossoms can be created or expanded during a stage,
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and a blossom can contain _O(n)_ vertices,
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therefore the total number of updates to the array could add up to _O(n<sup>3</sup>)_.
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To solve this, we use a special data structure: a _concatenable priority queue_.
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Each top-level blossom maintains an instance of this type of queue, containing its vertices.
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Each vertex is a member in precisely one such queue.
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To find the top-level blossom _B(x)_ that contains a given vertex _x_, we determine
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the queue instance in which the vertex is a member.
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This takes time _O(log n)_.
|
||||||
|
The queue instance corresponds directly to a specific blossom, which we can find
|
||||||
|
for example by storing a pointer to the blossom inside the queue instance.
|
||||||
|
|
||||||
|
When a new blossom is created, the concatenable queues of its sub-blossoms are merged
|
||||||
|
to form one concatenable queue for the new blossom.
|
||||||
|
The merged queue contains all vertices of the original queues.
|
||||||
|
Merging a pair of queues takes time _O(log n)_.
|
||||||
|
To merge the queues of _k_ sub-blossoms, the concatenation step is repeated _k-1_ times,
|
||||||
|
taking total time _O(k log n)_.
|
||||||
|
|
||||||
|
When a blossom is expanded, its concatenable queue is un-concatenated to recover separate queues
|
||||||
|
for the sub-blossoms.
|
||||||
|
This also takes time _O(log n)_ for each sub-blossom.
|
||||||
|
|
||||||
|
Implementation details of concatenable queues are discussed later in this document.
|
||||||
|
|
||||||
|
### Lazy updating of dual variables
|
||||||
|
|
||||||
|
During a delta step, the dual variables of labeled vertices and blossoms change as described above.
|
||||||
|
Updating these variables directly would take time _O(n)_ per delta step.
|
||||||
|
The total number of delta steps during a matching may be _Θ(n<sup>2</sup>)_,
|
||||||
|
pushing the total time to update dual variables to _O(n<sup>3</sup>)_ which is too slow.
|
||||||
|
|
||||||
|
To solve this, [[4]](#galil_micali_gabow1986) describes a technique that stores dual values
|
||||||
|
in a _modified_ form which is invariant under delta steps.
|
||||||
|
The modified values can be converted back to the true dual values when necessary.
|
||||||
|
[[7]](#mehlhorn_schafer2002) describes a slightly different technique which I find easier
|
||||||
|
to understand.
|
||||||
|
My implementation is very similar to theirs.
|
||||||
|
|
||||||
|
The first trick is to keep track of the running sum of _δ_ values since the beginning of the algorithm.
|
||||||
|
Let's call that number _Δ_.
|
||||||
|
At the start of the algorithm _Δ = 0_, but the value increases as the algorithm goes through delta steps.
|
||||||
|
|
||||||
|
For each non-trivial blossom, rather than storing its true dual value, we store a _modified_ dual value:
|
||||||
|
|
||||||
|
- For an S-blossom, the modified dual value is _z'<sub>B</sub> = z<sub>B</sub> - 2 Δ_
|
||||||
|
- For a T-blossom, the modified dual value is _z'<sub>B</sub> = z<sub>B</sub> + 2 Δ_
|
||||||
|
- For an unlabeled blossom or non-top-level blossom, the modified dual value is equal
|
||||||
|
to the true dual value.
|
||||||
|
|
||||||
|
These modified values are invariant under delta steps.
|
||||||
|
Thus, there is no need to update the stored values during a delta step.
|
||||||
|
|
||||||
|
Since the modified blossom dual value depends on the label (S or T) of the blossom,
|
||||||
|
the modified value must be updated whenever the label of the blossom changes.
|
||||||
|
This update can be done in constant time, and changing the label of a blossom is
|
||||||
|
in any case an explicit step, so this won't increase the asymptotic run time.
|
||||||
|
|
||||||
|
For each vertex, rather than storing its true dual value, we store a _modified_ dual value:
|
||||||
|
|
||||||
|
- For an S-vertex, the modified dual value is _u'<sub>x</sub> = u<sub>x</sub> + Δ_
|
||||||
|
- For a T-vertex, the modified dual value is _u'<sub>x</sub> = u<sub>x</sub> - offset<sub>B(x)</sub> - Δ_
|
||||||
|
- For an unlabeled vertex, the modified dual value is _u'<sub>x</sub> = u<sub>x</sub> - offset<sub>B(x)</sub>_
|
||||||
|
|
||||||
|
where _offset<sub>B</sub>_ is an extra variable which is maintained for each top-level blossom.
|
||||||
|
|
||||||
|
Again, the modified values are invariant under delta steps, which implies that no update
|
||||||
|
to the stored values is necessary during a delta step.
|
||||||
|
|
||||||
|
Since the modified vertex dual value depends on the label (S or T) of its top-level blossom,
|
||||||
|
an update is necessary when that label changes.
|
||||||
|
For S-vertices, we can afford to apply that update directly to the vertices involved.
|
||||||
|
This is possible since a vertex becomes an S-vertex at most once per stage.
|
||||||
|
|
||||||
|
The situation is more complicated for T-vertices.
|
||||||
|
During a stage, a T-vertex can become unlabeled if it is part of a T-blossom that gets expanded.
|
||||||
|
The same vertex can again become a T-vertex, then again become unlabeled during a subsequent
|
||||||
|
blossom expansion.
|
||||||
|
In this way, a vertex can transition between T-vertex and unlabeled vertex up to _O(n)_ times
|
||||||
|
within a stage.
|
||||||
|
We can not afford to update the stored modified vertex dual so many times.
|
||||||
|
This is where the _offset_ variables come in.
|
||||||
|
If a blossom becomes a T-blossom, rather than updating the modified duals of all vertices,
|
||||||
|
we update only the _offset_ variable of the blossom such that the modified vertex duals
|
||||||
|
remain unchanged.
|
||||||
|
If a blossom is expanded, we push the _offset_ values down to its sub-blossoms.
|
||||||
|
|
||||||
|
### Efficiently computing _δ_
|
||||||
|
|
||||||
|
To perform a delta step, the algorithm computes the values
|
||||||
of _δ<sub>1</sub>_, _δ<sub>2</sub>_, _δ<sub>3</sub>_ and _δ<sub>4</sub>_
|
of _δ<sub>1</sub>_, _δ<sub>2</sub>_, _δ<sub>3</sub>_ and _δ<sub>4</sub>_
|
||||||
and determine which edge (_δ<sub>2</sub>_, _δ<sub>3</sub>_) or
|
and determines which edge (_δ<sub>2</sub>_, _δ<sub>3</sub>_) or
|
||||||
blossom (_δ<sub>4</sub>_) achieves the minimum value.
|
blossom (_δ<sub>4</sub>_) achieves the minimum value.
|
||||||
|
|
||||||
The total number of dual updates during a matching may be _Θ(n<sup>2</sup>)_.
|
A naive implementation might compute _δ_ by looping over the vertices, blossoms and edges
|
||||||
Since we want to limit the total number of steps of the matching algorithm to _O(n<sup>3</sup>)_,
|
in the graph.
|
||||||
each dual update may use at most _O(n)_ steps.
|
The total number of delta steps during a matching may be _Θ(n<sup>2</sup>)_,
|
||||||
|
pushing the total time for _δ_ calculations to _O(n<sup>2</sup> m)_ which is much too slow.
|
||||||
|
[[4]](#galil_micali_gabow1986) introduces a combination of data structures from which
|
||||||
|
the value of _δ_ can be computed efficiently.
|
||||||
|
|
||||||
We can find _δ<sub>1</sub>_ in _O(n)_ steps by simply looping over all vertices
|
_δ<sub>1</sub>_ is the minimum dual value of any S-vertex.
|
||||||
and checking their dual variables.
|
This value can be computed in constant time.
|
||||||
We can find _δ<sub>4</sub>_ in _O(n)_ steps by simply looping over all non-trivial blossoms
|
The dual value of an unmatched vertex is reduced by _δ_ during every delta step.
|
||||||
(since there are fewer than _n_ non-trivial blossoms).
|
Since all vertex duals start with the same dual value _u<sub>start</sub>_,
|
||||||
We could find _δ<sub>2</sub>_ and _δ<sub>3</sub>_ by simply looping over
|
all unmatched vertices have dual value _δ<sub>1</sub> = u<sub>start</sub> - Δ_.
|
||||||
all edges of the graph in _O(m)_ steps, but that exceeds our budget of _O(n)_ steps.
|
|
||||||
So we need better techniques.
|
|
||||||
|
|
||||||
For _δ<sub>2</sub>_, we determine the least-slack edge between an S-blossom and unlabeled
|
_δ<sub>3</sub>_ is half of the minimum slack of any edge between two different S-blossoms.
|
||||||
blossom as follows.
|
To compute this efficiently, we keep edges between S-blossoms in a priority queue.
|
||||||
For every vertex _y_ in any unlabeled blossom, keep track of _e<sub>y</sub>_:
|
The edges are inserted into the queue during scanning of newly labeled S-vertices.
|
||||||
the least-slack edge that connects _y_ to any S-vertex.
|
To compute _δ<sub>3</sub>_, we simply find the minimum-priority element of the queue.
|
||||||
The thing to keep track of is the identity of the edge, not the slack value.
|
|
||||||
This information is kept up-to-date as part of the procedure that considers S-vertices.
|
|
||||||
The scanning procedure eventually considers all edges _(x, y, w)_ where _x_ is an S-vertex.
|
|
||||||
At that moment _e<sub>y</sub>_ is updated if the new edge has lower slack.
|
|
||||||
|
|
||||||
Calculating _δ<sub>2</sub>_ then becomes a matter of looping over all vertices _x_,
|
A complication may occur when a new blossom is created.
|
||||||
checking whether _B(x)_ is unlabeled and calculating the slack of _e<sub>x</sub>_.
|
Edges that connect different top-level S-blossoms before creation of the new blossom,
|
||||||
|
may end up as internal edges inside the newly created blossom.
|
||||||
|
This implies that such edges would have to be removed from the _δ<sub>3</sub>_ priority queue,
|
||||||
|
but that would be quite difficult.
|
||||||
|
Instead, we just let those edges stay in the queue.
|
||||||
|
When computing the value of _δ<sub>3</sub>_, we thus have to check whether the minimum
|
||||||
|
element represents an edge between different top-level blossoms.
|
||||||
|
If not, we discard such stale elements until we find an edge that does.
|
||||||
|
|
||||||
One subtle aspect of this technique is that a T-vertex can loose its label when
|
A complication occurs when dual variables are updated.
|
||||||
the containing T-blossom gets expanded.
|
At that point, the slack of any edge between different S-blossoms decreases by _2\*δ_.
|
||||||
At that point, we suddenly need to have kept track of its least-slack edge to any S-vertex.
|
But we can not afford to update the priorities of all elements in the queue.
|
||||||
It is therefore necessary to do the same tracking also for T-vertices.
|
To solve this, we set the priority of each edge to its _modified slack_.
|
||||||
So the technique is: For any vertex that is not an S-vertex, track its least-slack edge
|
|
||||||
to any S-vertex.
|
|
||||||
|
|
||||||
Another subtle aspect is that a T-vertex may have a zero-slack edge to an S-vertex.
|
The _modified slack_ of an edge is defined as follows:
|
||||||
Even though these edges are already tight, they must still be tracked.
|
|
||||||
If the T-vertex loses its label, this edge needs to be reconsidered by the scanning procedure.
|
|
||||||
By including these edges in least-slack edge tracking, they will be rediscovered
|
|
||||||
through a _δ<sub>2</sub>=0_ update after the vertex becomes unlabeled.
|
|
||||||
|
|
||||||
For _δ<sub>3</sub>_, we determine the least-slack edge between any pair of S-blossoms
|
$$ \pi'_{x,y} = u'_x + u'_y - w_{x,y} $$
|
||||||
as follows.
|
|
||||||
For every S-blossom _B_, keep track of _e<sub>B</sub>_:
|
|
||||||
the least-slack edge between _B_ and any other S-blossom.
|
|
||||||
Note that this is done per S-blossoms, not per S-vertex.
|
|
||||||
This information is kept up-to-date as part of the procedure that considers S-vertices.
|
|
||||||
Calculating _δ<sub>3</sub>_ then becomes a matter of looping over all S-blossoms _B_
|
|
||||||
and calculating the slack of _e<sub>B</sub>_.
|
|
||||||
|
|
||||||
A complication occurs when S-blossoms are merged.
|
The modified slack is computed in the same way as true slack, except it uses
|
||||||
Some of the least-slack edges of the sub-blossoms may be internal edges in the merged blossom,
|
the modified vertex duals instead of true vertex duals.
|
||||||
and therefore irrelevant for _δ<sub>3</sub>_.
|
Blossom duals are ignored since we will never compute the modified slack of an edge that
|
||||||
As a result, the proper _e<sub>B</sub>_ of the merged blossom may be different from all
|
is contained inside a blossom.
|
||||||
least-slack edges of its sub-blossoms.
|
Because modified vertex duals are invariant under delta steps, so is the modified edge slack.
|
||||||
An additional data structure is needed to find _e<sub>B</sub>_ of the merged blossom.
|
As a result, the priorities of edges in the priority queue remain unchanged during a delta step.
|
||||||
|
|
||||||
For every S-blossom _B_, maintain a list _L<sub>B</sub>_ of edges between _B_ and
|
_δ<sub>4</sub>_ is half of the minimum dual variable of any T-blossom.
|
||||||
other S-blossoms.
|
To compute this efficiently, we keep non-trivial T-blossoms in a priority queue.
|
||||||
The purpose of _L<sub>B</sub>_ is to contain, for every other S-blossom, the least-slack edge
|
The blossoms are inserted into the queue when they become a T-blossom and removed from
|
||||||
between _B_ and that blossom.
|
the queue when they stop being a T-blossom.
|
||||||
These lists are kept up-to-date as part of the procedure that considers S-vertices.
|
|
||||||
While considering vertex _x_, if edge _(x, y, w)_ has positive slack,
|
|
||||||
and _B(y)_ is an S-blossom, the edge is inserted in _L<sub>B(x)</sub>_.
|
|
||||||
This may cause _L<sub>B(x)</sub>_ to contain multiple edges to _B(y)_.
|
|
||||||
That's okay as long as it definitely contains the least-slack edge to _B(y)_.
|
|
||||||
|
|
||||||
When a new S-blossom is created, form its list _L<sub>B</sub>_ by merging the lists
|
A complication occurs when dual variables are updated.
|
||||||
of its sub-blossoms.
|
At that point, the dual variable of any T-blossom decreases by _2\*δ_.
|
||||||
Ignore edges that are internal to the merged blossom.
|
But we can not afford to update the priorities of all elements in the queue.
|
||||||
If there are multiple edges to the same target blossom, keep only the least-slack of these edges.
|
To solve this, we set the priority of each blossom to its _modified_ dual value
|
||||||
Then find _e<sub>B</sub>_ of the merged blossom by simply taking the least-slack edge
|
_z'<sub>B</sub> = z<sub>B</sub> + 2\*Δ_.
|
||||||
out of _L<sub>B</sub>_.
|
These values are invariant under delta steps.
|
||||||
|
|
||||||
|
_δ<sub>2</sub>_ is the minimum slack of any edge between an S-vertex and unlabeled vertex.
|
||||||
|
To compute this efficiently, we use a fairly complicated strategy that involves
|
||||||
|
three levels of priority queues.
|
||||||
|
|
||||||
|
At the lowest level, every T-vertex or unlabeled vertex maintains a separate priority queue
|
||||||
|
of edges between itself and any S-vertex.
|
||||||
|
Edges are inserted into this queue during scanning of newly labeled S-vertices.
|
||||||
|
Note that S-vertices do not maintain this type of queue.
|
||||||
|
|
||||||
|
The priorities of edges in these queues are set to their _modified slack_.
|
||||||
|
This ensures that the priorities remain unchanged during delta steps.
|
||||||
|
The priorities also remain unchanged when the T-vertex becomes unlabeled or the unlabeled
|
||||||
|
vertex becomes a T-vertex.
|
||||||
|
|
||||||
|
At the middle level, every T-blossom or unlabeled top-level blossom maintains a priority queue
|
||||||
|
containing its vertices.
|
||||||
|
This is in fact the _concatenable priority queue_ that is maintained by every top-level blossom
|
||||||
|
as was described earlier in this document.
|
||||||
|
The priority of each vertex in the mid-level queue is set to the minimum priority of any edge
|
||||||
|
in the low-level queue of that vertex.
|
||||||
|
If edges are added to (or removed from) the low-level queue, the priority of the corresponding
|
||||||
|
vertex in the mid-level queue may change.
|
||||||
|
If the low-level queue of a vertex is empty, that vertex has priority _Infinity_
|
||||||
|
in the mid-level queue.
|
||||||
|
|
||||||
|
At the highest level, unlabeled top-level blossoms are tracked in one global priority queue.
|
||||||
|
The priority of each blossom in this queue is set to the minimum slack of any edge
|
||||||
|
from that blossom to an S-vertex plus _Δ_.
|
||||||
|
These priorities are invariant under delta steps.
|
||||||
|
|
||||||
|
To compute _δ<sub>2</sub>_, we find the minimum priority in the high-level queue
|
||||||
|
and adjust it by _Δ_.
|
||||||
|
To find the edge associated with _δ<sub>2</sub>_,
|
||||||
|
we use the high-level queue to find the unlabeled blossom with minimum priority,
|
||||||
|
then use that blossom's mid-level queue to find the vertex with minimum priority,
|
||||||
|
then use that vertex's low-level queue to find the edge with minimum priority.
|
||||||
|
|
||||||
|
The whole thing is a bit tricky, but it works.
|
||||||
|
|
||||||
|
### Re-using alternating trees
|
||||||
|
|
||||||
|
According to [[5]](#galil1986), labels and alternating trees should be erased at the end of each stage.
|
||||||
|
However, the algorithm can be optimized by keeping some of the labels and re-using them
|
||||||
|
in the next stage.
|
||||||
|
The optimized algorithm erases _only_ the two alternating trees that are part of
|
||||||
|
the augmenting path.
|
||||||
|
All blossoms in those two trees lose their labels and become free blossoms again.
|
||||||
|
Other alternating trees, which are not involved in the augmenting path, are preserved
|
||||||
|
into the next stage, and so are the labels on the blossoms in those trees.
|
||||||
|
|
||||||
|
This optimization is well known and is described for example in [[7]](#mehlhorn_schafer2002).
|
||||||
|
It does not affect the worst-case asymptotic run time of the algorithm,
|
||||||
|
but it provides a significant practical speed up for many types of graphs.
|
||||||
|
|
||||||
|
Erasing alternating trees is easy enough, but selectively stripping labels off blossoms
|
||||||
|
has a few implications.
|
||||||
|
The blossoms that lose their labels need to have their modified dual values updated.
|
||||||
|
The T-blossoms additionally need to have their _offset<sub>B</sub>_ variables updated
|
||||||
|
to keep the vertex dual values consistent.
|
||||||
|
For S-blossoms that lose their labels, the modified vertex dual variables are updated directly.
|
||||||
|
|
||||||
|
The various priority queues also need updating.
|
||||||
|
Former T-blossoms must be removed from the priority queue for _δ<sub>4</sub>_.
|
||||||
|
Edges incident on former S-vertices must be removed from the priority queues for _δ<sub>3</sub>_ and _δ<sub>2</sub>_.
|
||||||
|
Finally, S-vertices that become unlabeled need to construct a proper priority queue
|
||||||
|
of incident edges to other S-vertices for _δ<sub>2</sub>_ tracking.
|
||||||
|
This involves visiting every incident edge of every vertex in each S-blossom that loses its label.
|
||||||
|
|
||||||
## Run time of the algorithm
|
## Run time of the algorithm
|
||||||
|
|
||||||
Every stage of the algorithm either increases the number of matched vertices by 2 or
|
Every stage of the algorithm either increases the number of matched vertices by 2 or
|
||||||
ends the matching.
|
ends the matching.
|
||||||
Therefore the number of stages is at most _n/2_.
|
Therefore the number of stages is at most _n/2_.
|
||||||
Every stage runs in _O(n<sup>2</sup>)_ steps, therefore the complete algorithm runs in
|
Every stage runs in time _O((n + m) log n)_, therefore the complete algorithm runs in
|
||||||
_O(n<sup>3</sup>)_ steps.
|
time _O(n (n + m) log n)_.
|
||||||
|
|
||||||
During each stage, edge scanning is driven by the queue _Q_.
|
|
||||||
Every vertex enters _Q_ at most once.
|
|
||||||
Each vertex that enters _Q_ has its incident edges scanned, causing every edge in the graph
|
|
||||||
to be scanned at most twice per stage.
|
|
||||||
Scanning an edge is done in constant time, unless it leads to the discovery of a blossom
|
|
||||||
or an augmenting path, which will be separately accounted for.
|
|
||||||
Therefore edge scanning needs _O(m)_ steps per stage.
|
|
||||||
|
|
||||||
Creating a blossom reduces the number of top-level blossoms by at least 2,
|
Creating a blossom reduces the number of top-level blossoms by at least 2,
|
||||||
thus limiting the number of simultaneously existing blossoms to _O(n)_.
|
thus limiting the number of simultaneously existing blossoms to _O(n)_.
|
||||||
Blossoms that are created during a stage become S-blossoms and survive until the end of that stage,
|
Blossoms that are created during a stage become S-blossoms and survive until the end of that stage,
|
||||||
therefore _O(n)_ blossoms are created during a stage.
|
therefore _O(n)_ blossoms are created during a stage.
|
||||||
|
Creating a blossom with _k_ sub-blossoms reduces the number of top-level blossoms by _k-1_,
|
||||||
|
thus limiting the total number of sub-blossoms that can be involved in blossom creation
|
||||||
|
during a stage to _O(n)_.
|
||||||
|
|
||||||
Creating a blossom involves tracing the alternating path to the closest common ancestor,
|
Creating a blossom involves tracing the alternating path to the closest common ancestor,
|
||||||
and some bookkeeping per sub-blossom,
|
which takes time _O(k log n)_ for a blossom with _k_ sub-blossoms.
|
||||||
and inserting new S-vertices _Q_,
|
It also involves bookkeeping per sub-blossom, which takes time _O(log n)_ per sub-blossom.
|
||||||
all of which can be done in _O(n)_ steps per blossom creation.
|
It also involves relabeling former T-vertices as S-vertices, but I account for that
|
||||||
The cost of managing least-slack edges between S-blossoms will be separately accounted for.
|
time separately below so I can ignore it here.
|
||||||
Therefore blossom creation needs _O(n<sup>2</sup>)_ steps per stage
|
It also involves merging the concatenable queues which track the vertices in top-level blossoms.
|
||||||
(excluding least-slack edge management).
|
Merging two queues takes time _O(log n)_, therefore merging the queues of all sub-blossoms
|
||||||
|
takes time _O(k log n)_.
|
||||||
|
Creating a blossom thus takes time _O(k log n)_.
|
||||||
|
Blossom creation thus takes total time _O(n log n)_ per stage.
|
||||||
|
|
||||||
As part of creating a blossom, a list _L<sub>B</sub>_ of least-slack edges must be formed.
|
During each stage, a blossom becomes an S-blossom or T-blossom at most once.
|
||||||
This involves processing every element of all least-slack edge lists of its sub-blossoms,
|
A blossom also becomes unlabeled at most once, at the end of the stage.
|
||||||
and removing redundant edges from the merged list.
|
Changing the label of a blossom takes some simple bookkeeping, as well as operations
|
||||||
Merging and removing redundant edges can be done in one sweep via a temporary array indexed
|
on priority queues (_δ<sub>4</sub>_ for T-blossoms, _δ<sub>2</sub>_ for unlabeled
|
||||||
by target blossom.
|
blossoms) which take time _O(log n)_ per blossom.
|
||||||
Collect the least-slack edges of the sub-blossoms into this array,
|
Assigning label S or removing label S also involves work for the vertices in the blossom
|
||||||
indexed by the target blossom of the edge,
|
and their edges, but I account for that time separately below so I can ignore it here.
|
||||||
keeping only the edge with lowest slack per target blossom.
|
Blossom labeling thus takes total time _O(n log n)_ per stage.
|
||||||
Then convert the array back into a list by removing unused indices.
|
|
||||||
This takes _O(1)_ steps per candidate edge, plus _O(n)_ steps to manage the temporary array.
|
|
||||||
I choose to shift the cost of collecting the candidate edges from the sub-blossoms to
|
|
||||||
the actions that inserted those edges into the sub-blossom lists.
|
|
||||||
There are two processes which insert edges into _L<sub>B</sub>_: edge scanning and blossom
|
|
||||||
creation.
|
|
||||||
Edge scanning inserts each graph edge at most twice per stage for a total cost of _O(m)_ steps
|
|
||||||
per stage.
|
|
||||||
Blossom creation inserts at most _O(n)_ edges per blossom creation.
|
|
||||||
Therefore the total cost of S-blossom least-slack edge management is
|
|
||||||
_O(m + n<sup>2</sup>) = O(n<sup>2</sup>)_ steps per stage.
|
|
||||||
|
|
||||||
The number of blossom expansions during a stage is _O(n)_.
|
During each stage, a vertex becomes an S-vertex at most once, and an S-vertex becomes
|
||||||
Expanding a blossom involves some bookkeeping per sub-blossom,
|
unlabeled at most once.
|
||||||
and reconstructing the alternating path through the blossom,
|
In both cases, the incident edges of the affected vertex are scanned and potentially
|
||||||
and inserting any new S-vertices into _Q_,
|
added to or removed from priority queues.
|
||||||
all of which can be done in _O(n)_ steps per blossom.
|
This involves finding the top-level blossoms of the endpoints of each edge, which
|
||||||
Therefore blossom expansion needs _O(n<sup>2</sup>)_ steps per stage.
|
takes time _O(log n)_ per edge.
|
||||||
|
The updates to priority queues also take time _O(log n)_ per edge.
|
||||||
|
Edge scanning thus takes total time _O(m log n)_ per stage.
|
||||||
|
|
||||||
|
Note that _m ≤ n<sup>2</sup>_ therefore _log m ≤ 2 log n_.
|
||||||
|
This implies that an operation on a priority queue with _m_ elements takes time _O(log n)_.
|
||||||
|
|
||||||
|
Expanding a blossom involves some bookkeeping which takes time _O(log n)_ per sub-blossom.
|
||||||
|
It also involves splitting the concatenable queue that tracks the vertices in top-level blossoms,
|
||||||
|
which takes time _O(log n)_ per sub-blossom.
|
||||||
|
In case of a T-blossom, it also involves reconstructing the alternating path through
|
||||||
|
the blossom which takes time _O(k log n)_ for _k_ sub-blossoms.
|
||||||
|
Also in case of a T-blossom, some sub-blossoms will become S-blossoms and their
|
||||||
|
vertices become S-vertices, but I have already accounted for that cost above
|
||||||
|
so I can ignore it here.
|
||||||
|
Expanding a blossom thus takes time _O(k log n)_.
|
||||||
|
Any blossom is involved as a sub-blossom in an expanding blossom at most once per stage.
|
||||||
|
Blossom expansion thus takes total time _O(n log n)_ per stage.
|
||||||
|
|
||||||
The length of an augmenting path is _O(n)_.
|
The length of an augmenting path is _O(n)_.
|
||||||
Tracing the augmenting path and augmenting the matching along the path can be done in _O(n)_ steps.
|
Tracing the augmenting path and augmenting the matching along the path can be done
|
||||||
Augmenting through a blossom takes a number of steps that is proportional in the number of
|
in _O(n log n)_ steps.
|
||||||
|
Augmenting through a blossom takes a number of steps that is proportional to the number of
|
||||||
its sub-blossoms.
|
its sub-blossoms.
|
||||||
Since there are fewer than _n_ non-trivial blossoms, the total cost of augmenting through
|
Since there are fewer than _n_ non-trivial blossoms, the total cost of augmenting through
|
||||||
blossoms is _O(n)_ steps.
|
blossoms is _O(n)_ steps.
|
||||||
Therefore the total cost of augmenting is _O(n)_ steps per stage.
|
Augmenting thus takes total time _O(n log n)_ per stage.
|
||||||
|
|
||||||
A dual variable update limited by _δ<sub>1</sub>_ ends the algorithm and therefore
|
A delta step limited by _δ<sub>1</sub>_ ends the algorithm and therefore happens at most once.
|
||||||
happens at most once.
|
A _δ<sub>2</sub>_ step assigns a label to a previously unlabeled blossom and therefore
|
||||||
An update limited by _δ<sub>2</sub>_ labels a previously labeled blossom
|
happens _O(n)_ times per stage.
|
||||||
and therefore happens _O(n)_ times per stage.
|
A _δ<sub>3</sub>_ step either creates a blossom or finds an augmenting path and therefore
|
||||||
An update limited by _δ<sub>3</sub>_ either creates a blossom or finds an augmenting path
|
happens _O(n)_ times per stage.
|
||||||
and therefore happens _O(n)_ times per stage.
|
A _δ<sub>4</sub>_ step expands a blossom and therefore happens _O(n)_ times per stage.
|
||||||
An update limited by _δ<sub>4</sub>_ expands a blossom and therefore happens
|
Therefore the number of delta steps is _O(n)_ per stage.
|
||||||
_O(n)_ times per stage.
|
|
||||||
Therefore the number of dual variable updates is _O(n)_ per stage.
|
|
||||||
The cost of calculating the _δ_ values is _O(n)_ per update as discussed above.
|
|
||||||
Applying changes to the dual variables can be done by looping over all vertices and looping over
|
|
||||||
all top-level blossoms in _O(n)_ steps per update.
|
|
||||||
Therefore the total cost of dual variable updates is _O(n<sup>2</sup>)_ per stage.
|
|
||||||
|
|
||||||
|
Calculating _δ<sub>1</sub>_ takes constant time.
|
||||||
|
Calculating _δ<sub>2</sub>_ and _δ<sub>4</sub>_ requires a constant number
|
||||||
|
of lookups in priority queues which takes time _O(log n)_ per delta step.
|
||||||
|
During calculation of _δ<sub>3</sub>_, it may be necessary to remove stage edges
|
||||||
|
from the priority queue.
|
||||||
|
Since every edge is inserted into the priority queue at most once per stage,
|
||||||
|
at most _O(m)_ edges are removed per stage, which takes total time _O(m log n)_ per stage.
|
||||||
|
Calculation of _δ_ thus takes total time _O((n + m) log n)_ per stage.
|
||||||
|
|
||||||
|
Applying updates to dual variables is done in a lazy fashion as discussed above.
|
||||||
|
The only variable that is updated directly is _Δ_, which takes time _O(1)_ per delta step.
|
||||||
|
Updating dual variables thus takes total time _O(n)_ per stage.
|
||||||
|
|
||||||
## Implementation details
|
## Implementation details
|
||||||
|
|
||||||
|
@ -819,17 +1006,100 @@ Every edge therefore appears in two adjacency lists.
|
||||||
These data structures are initialized at the start of the matching algorithm
|
These data structures are initialized at the start of the matching algorithm
|
||||||
and never change while the algorithm runs.
|
and never change while the algorithm runs.
|
||||||
|
|
||||||
|
#### Priority queue
|
||||||
|
|
||||||
|
Priority queues are used for a number of purposes:
|
||||||
|
|
||||||
|
- a priority queue to find the least-slack edge between S-blossoms;
|
||||||
|
- a priority queue to find the minimum-dual T-blossom;
|
||||||
|
- a priority queue to find the unlabeled blossom with least-slack edge to an S-blossom;
|
||||||
|
- a separate priority queue per vertex to find the least-slack edge between that vertex
|
||||||
|
and any S-vertex.
|
||||||
|
|
||||||
|
These queues are implemented as a binary heaps.
|
||||||
|
This type of queue supports the following operations:
|
||||||
|
|
||||||
|
- _insert_ a new element with specified priority in time _O(log n)_;
|
||||||
|
- find the element with _minimum_ priority in time _O(1)_;
|
||||||
|
- _delete_ a specified element in time _O(log n)_;
|
||||||
|
- _change_ the priority of a specified element in time _O(log n)_.
|
||||||
|
|
||||||
|
#### Concatenable priority queue
|
||||||
|
|
||||||
|
Each top-level blossom maintains a concatenable priority queue containing its vertices.
|
||||||
|
We use a specific type of concatenable queue that supports the following operations
|
||||||
|
[[4]](#galil_micali_gabow1986) [[8]](#aho_hopcroft_ullman1974):
|
||||||
|
|
||||||
|
- _create_ a new queue containing 1 new element;
|
||||||
|
- find the element with _minimum_ priority in time _O(1)_;
|
||||||
|
- _change_ the priority of a given element in time _O(log n)_;
|
||||||
|
- _merge_ two queues into one new queue in time _O(log n)_;
|
||||||
|
- _split_ a queue, thus undoing the previous _merge_ step in time _O(log n)_.
|
||||||
|
|
||||||
|
The efficient _merge_ and _split_ operations make it possible to adapt the queue during
|
||||||
|
blossom creation and blossom expansion steps.
|
||||||
|
The priorities in the queue are used to find, for a given top-level blossom, its vertex
|
||||||
|
with least-slack edge to an S-blossom.
|
||||||
|
|
||||||
|
The concatenable queue is implemented as a balanced tree, specifically a _2-3 tree_.
|
||||||
|
Each internal node of a 2-3 tree has either 2 or 3 children.
|
||||||
|
The leaf nodes of the tree represent the elements of the queue.
|
||||||
|
All leaf nodes are at the same distance from the root.
|
||||||
|
Each node has a pointer to its parent, and each internal node has pointers to its children.
|
||||||
|
Each internal node also stores its height (distance to its leaf nodes).
|
||||||
|
|
||||||
|
Only leaf nodes have a priority.
|
||||||
|
However, each internal node maintains a pointer to the leaf node with minimum priority
|
||||||
|
within its subtree.
|
||||||
|
As a consequence, the root of the tree has a pointer to the least-priority element in the queue.
|
||||||
|
To keep this information consistent, any change in the priority of a leaf node must
|
||||||
|
be followed by updating the internal nodes along a path from the leaf node to the root.
|
||||||
|
The same must be done when the structure of the tree is adjusted.
|
||||||
|
|
||||||
|
The left-to-right order of the leaf nodes is preserved during all operations, including _merge_
|
||||||
|
and _split_.
|
||||||
|
When trees _A_ and _B_ are merged, the sequence of leaf nodes in the merged tree will consist of
|
||||||
|
the leaf nodes of _A_ followed by the leaf nodes of _B_.
|
||||||
|
Note that the left-to-right order of the leaf nodes is unrelated to the priorities of the elements.
|
||||||
|
|
||||||
|
To merge two trees, the root of the smaller tree is inserted as a child of an appropriate node
|
||||||
|
in the larger tree.
|
||||||
|
Subsequent adjustments are needed restore the consistency the 2-3 tree and to update
|
||||||
|
the minimum-element pointers of the internal nodes along a path from the insertion point
|
||||||
|
to the root of the merged tree.
|
||||||
|
This can be done in a number of steps proportional to the difference in height between
|
||||||
|
the two trees, which is in any case _O(log n)_.
|
||||||
|
|
||||||
|
To split a tree, a _split node_ is identified: the left-most leaf node that must end up
|
||||||
|
in the right-side tree after splitting.
|
||||||
|
Internal nodes are deleted along the path from the _split node_ to the root of the tree.
|
||||||
|
This creates a forest of disconnected subtrees on the left side of the path,
|
||||||
|
and a similar forest of subtrees on the right side of the split path.
|
||||||
|
The left-side subtrees are reassembled into a single tree through a series of _merge_ steps.
|
||||||
|
Although _O(log n)_ merge steps may be needed, the total time required for reassembly
|
||||||
|
is also _O(log n)_ because each merge step combines trees of similar height.
|
||||||
|
A similar reassembly is done for the forest on the right side of the split path.
|
||||||
|
|
||||||
|
The concatenable queues have an additional purpose in the matching algorithm:
|
||||||
|
finding the top-level blossom that contains a given vertex.
|
||||||
|
To do this, we assign a _name_ to each concatenable queue instance, which is simply
|
||||||
|
a pointer to the top-level blossom that maintains the queue.
|
||||||
|
An extra operation is defined:
|
||||||
|
_find_ the name of the queue instance that contains a given element in time _O(log n)_.
|
||||||
|
Implementing the _find_ operation is easy:
|
||||||
|
Starting at the leaf node that represents the element, follow _parent_ pointers
|
||||||
|
to the root of the tree.
|
||||||
|
The root node contains the name of the queue.
|
||||||
|
|
||||||
#### General data
|
#### General data
|
||||||
|
|
||||||
`vertex_mate[x] = y` if the edge between vertex _x_ and vertex _y_ is matched. <br>
|
`vertex_mate[x] = y` if the edge between vertex _x_ and vertex _y_ is matched. <br>
|
||||||
`vertex_mate[x] = -1` if vertex _x_ is unmatched.
|
`vertex_mate[x] = -1` if vertex _x_ is unmatched.
|
||||||
|
|
||||||
`vertex_top_blossom[x] =` pointer to _B(x)_, the top-level blossom that contains vertex _x_.
|
`vertex_dual[x]` holds the modified vertex dual _u'<sub>x</sub>_.
|
||||||
|
|
||||||
`vertex_dual[x]` holds the value of _u<sub>x</sub>_.
|
A global list holds vertex indices of S-vertices whose edges have not yet been scanned.
|
||||||
|
Vertices are inserted in this list when their top-level blossom gets label S.
|
||||||
A FIFO queue holds vertex indices of S-vertices whose edges have not yet been scanned.
|
|
||||||
Vertices are inserted in this queue as soon as their top-level blossom gets label S.
|
|
||||||
|
|
||||||
#### Blossoms
|
#### Blossoms
|
||||||
|
|
||||||
|
@ -842,56 +1112,28 @@ Both types of blossoms are represented as class instances with the following att
|
||||||
* `B.label` is `S` or `T` or `None`
|
* `B.label` is `S` or `T` or `None`
|
||||||
* `B.tree_edge = (x, y)` if _B_ is a labeled top-level blossom, where _y_ is a vertex in _B_
|
* `B.tree_edge = (x, y)` if _B_ is a labeled top-level blossom, where _y_ is a vertex in _B_
|
||||||
and _(x, y)_ is the edge that links _B_ to its parent in the alternating tree.
|
and _(x, y)_ is the edge that links _B_ to its parent in the alternating tree.
|
||||||
|
* `B.tree_blossoms` points to a list of blossoms in the same alternating tree, if _B_
|
||||||
|
is a labeled top-level blossom.
|
||||||
|
* `B.vertex_dual_offset` holds the pending change to vertex duals _offset<sub>B</sub>_.
|
||||||
|
|
||||||
A non-trivial blossom additionally has the following attributes:
|
A non-trivial blossom additionally has the following attributes:
|
||||||
|
|
||||||
* `B.subblossoms` is an array of pointers to the sub-blossoms of _B_,
|
* `B.subblossoms` is an array of pointers to the sub-blossoms of _B_,
|
||||||
starting with the sub-blossom that contains the base vertex.
|
starting with the sub-blossom that contains the base vertex.
|
||||||
* `B.edges` is an array of alternating edges connecting the sub-blossoms.
|
* `B.edges` is an array of alternating edges connecting the sub-blossoms.
|
||||||
* `B.dual_var` holds the value of _z<sub>B</sub>_.
|
* `B.dual_var` holds the modified blossom dual _z'<sub>B</sub>_.
|
||||||
|
|
||||||
Single-vertex blossoms are kept in an array indexed by vertex index. <br>
|
Single-vertex blossoms are kept in an array indexed by vertex index. <br>
|
||||||
Non-trivial blossoms are kept in a separate array. <br>
|
Non-trivial blossoms are kept in a separate list. <br>
|
||||||
These arrays are used to iterate over blossoms and to find the trivial blossom
|
These arrays are used to iterate over blossoms and to find the trivial blossom
|
||||||
that consists of a given vertex.
|
that consists of a given vertex.
|
||||||
|
|
||||||
#### Least-slack edge tracking
|
|
||||||
|
|
||||||
`vertex_best_edge[x]` is an array holding _e<sub>x</sub>_, the edge index of
|
|
||||||
the least-slack edge between vertex _x_ and any S-vertex, or -1 if there is no such edge.
|
|
||||||
This value is only meaningful if _x_ is a T-vertex or unlabeled vertex.
|
|
||||||
|
|
||||||
`B.best_edge` is a blossom attribute holding _e<sub>B</sub>_, the edge index of the least-slack
|
|
||||||
edge between blossom _B_ and any other S-blossom, or -1 if there is no such edge.
|
|
||||||
This value is only meaningful if _B_ is a top-level S-blossom.
|
|
||||||
|
|
||||||
For non-trivial S-blossoms _B_, attribute `B.best_edge_set` holds the list _L<sub>B</sub>_
|
|
||||||
of potential least-slack edges to other blossoms.
|
|
||||||
This list is not maintained for single-vertex blossoms, since _L<sub>B</sub>_ of a single vertex
|
|
||||||
can be efficiently constructed from its adjacency list.
|
|
||||||
|
|
||||||
#### Memory usage
|
#### Memory usage
|
||||||
|
|
||||||
The data structures described above use a constant amount of memory per vertex and per edge
|
The data structures described above use a constant amount of memory per vertex and per edge
|
||||||
and per blossom.
|
and per blossom.
|
||||||
Therefore the total memory requirement is _O(m + n)_.
|
Therefore the total memory requirement is _O(m + n)_.
|
||||||
|
|
||||||
The memory usage of _L<sub>B</sub>_ is a little tricky.
|
|
||||||
Any given list _L<sub>B</sub>_ can have length _O(n)_, and _O(n)_ of these lists can exist
|
|
||||||
simultaneously.
|
|
||||||
Naively allocating space for _O(n)_ elements per list will drive memory usage
|
|
||||||
up to _O(n<sup>2</sup>)_.
|
|
||||||
However, at any moment, an edge can be in at most two of these lists, therefore the sum
|
|
||||||
of the lengths of these lists is limited to _O(m)_.
|
|
||||||
A possible solution is to implement the _L<sub>B</sub>_ as linked lists.
|
|
||||||
|
|
||||||
### Performance critical routines
|
|
||||||
|
|
||||||
Calculations that happen very frequently in the algorithm are:
|
|
||||||
determining the top-level blossom of a given vertex, and calculating the slack of a given edge.
|
|
||||||
These calculations must run in constant time per call in any case, but it makes sense to put
|
|
||||||
some extra effort into making these calculations _fast_.
|
|
||||||
|
|
||||||
### Recursion
|
### Recursion
|
||||||
|
|
||||||
Certain tasks in the algorithm are recursive in nature:
|
Certain tasks in the algorithm are recursive in nature:
|
||||||
|
@ -948,59 +1190,41 @@ Proof by induction that all vertex duals are multiples of 0.5 and all blossom du
|
||||||
- Blossom duals increase or decrease by _2\*δ_,
|
- Blossom duals increase or decrease by _2\*δ_,
|
||||||
therefore updated blossom duals are still integers.
|
therefore updated blossom duals are still integers.
|
||||||
|
|
||||||
The value of vertex dual variables and blossom dual variables never exceeds the
|
It is useful to know that (modified) dual variables and (modified) edge slacks
|
||||||
greatest edge weight in the graph.
|
are limited to a finite range of values which depends on the maximum edge weight.
|
||||||
This may be helpful for choosing an integer data type for the dual variables.
|
This may be helpful when choosing an integer data type for these variables.
|
||||||
(Alternatively, choose a programming language with unlimited integer range.
|
(Alternatively, choose a programming language with unlimited integer range.
|
||||||
This is perhaps the thing I love most about Python.)
|
This is perhaps the thing I love most about Python.)
|
||||||
|
|
||||||
Proof that dual variables do not exceed _max-weight_:
|
- The value of _Δ_ (sum over _δ_ steps) does not exceed _maxweight / 2_.
|
||||||
|
Proof:
|
||||||
- Vertex dual variables start at _u<sub>x</sub> = 0.5\*max-weight_.
|
- Vertex dual variables start at _u<sub>x</sub> = maxweight_ / 2.
|
||||||
- While the algorithm runs, there is at least one vertex which has been unmatched
|
- While the algorithm runs, there is at least one vertex which has been unmatched
|
||||||
since the beginning.
|
since the beginning.
|
||||||
This vertex has always had label S, therefore its dual always decreased by _δ_
|
This vertex has always had label S, therefore its dual is _maxweight/2 - Δ_.
|
||||||
during a dual variable update.
|
Vertex deltas can not be negative, therefore _Δ ≤ maxweight/2_.
|
||||||
Since it started at _0.5\*max-weight_ and can not become negative,
|
- Vertex duals are limited to the range 0 to _maxweight_.
|
||||||
the sum of _δ_ over all dual variable updates can not exceed _0.5\*max-weight_.
|
- Blossom duals are limited to the range 0 to _maxweight_.
|
||||||
- Vertex dual variables increase by at most _δ_ per update.
|
- Edge slack is limited to the range 0 to _2\*maxweight_.
|
||||||
Therefore no vertex dual can increase by more than _0.5\*max-weight_ in total.
|
- Modified vertex duals are limited to the range 0 to _1.5\*maxweight_.
|
||||||
Therefore no vertex dual can exceed _max-weight_.
|
- Modified blossom duals are limited to the range _-maxweight to 2\*maxweight_.
|
||||||
- Blossom dual variables start at _z<sub>B</sub> = 0_.
|
- Modified edge slack is limited to the range 0 to _3\*maxweight_.
|
||||||
- Blossom dual variables increase by at most _2\*δ_ per update.
|
- Dual offsets are limited to the range _-maxweight/2_ to _maxweight/2_.
|
||||||
Therefore no blossom dual can increase by more than _max-weight_ in total.
|
|
||||||
Therefore no blossom dual can exceed _max-weight_.
|
|
||||||
|
|
||||||
### Handling floating point edge weights
|
### Handling floating point edge weights
|
||||||
|
|
||||||
Floating point calculations are subject to rounding errors.
|
Floating point calculations are subject to rounding errors.
|
||||||
This has two consequences for the matching algorithm:
|
As a result, the algorithm may return a matching which has slightly lower weight than
|
||||||
|
the actual maximum weight.
|
||||||
|
|
||||||
- The algorithm may return a matching which has slightly lower weight than
|
The algorithm will allways return a valid matching, even if rounding errors occur.
|
||||||
the actual maximum weight.
|
Floating point comparisons affect which actions are taken during delta steps,
|
||||||
|
and thus eventually determine which edges are matched.
|
||||||
|
But the overall structure of the algorithm guarantees that it will eventually return
|
||||||
|
a valid (if possibly suboptimal) matching.
|
||||||
|
|
||||||
- The algorithm may not reliably recognize tight edges.
|
The most challenging cases are probably graphs with edge weights that differ by many orders
|
||||||
To check whether an edge is tight, its slack is compared to zero.
|
of magnitude.
|
||||||
Rounding errors may cause the slack to appear positive even when an exact calculation
|
|
||||||
would show it to be zero.
|
|
||||||
The slack of some edges may even become slightly negative.
|
|
||||||
|
|
||||||
I believe this does not affect the correctness of the algorithm.
|
|
||||||
An edge that should be tight but is not recognized as tight due to rounding errors,
|
|
||||||
can be pulled tight through an additional dual variable update.
|
|
||||||
As side-effect of this update, the edge will immediately be used to grow the alternating tree,
|
|
||||||
or construct a blossom or augmenting path.
|
|
||||||
This mechanism allows the algorithm to make progress, even if slack comparisons
|
|
||||||
are repeatedly thrown off by rounding errors.
|
|
||||||
Rounding errors may cause the algorithm to perform more dual variable updates
|
|
||||||
than strictly necessary.
|
|
||||||
But this will still not cause the run time of the algorithm to exceed _O(n<sup>3</sup>)_.
|
|
||||||
|
|
||||||
It seems to me that the matching algorithm is stable for floating point weights.
|
|
||||||
And it seems to me that it returns a matching which is close to optimal,
|
|
||||||
and could have been optimal if edge weights were changed by small amounts.
|
|
||||||
|
|
||||||
I must admit these arguments are mostly based on intuition.
|
|
||||||
Unfortunately I don't know how to properly analyze the floating point accuracy of this algorithm.
|
Unfortunately I don't know how to properly analyze the floating point accuracy of this algorithm.
|
||||||
|
|
||||||
### Finding a maximum weight matching out of all maximum cardinality matchings
|
### Finding a maximum weight matching out of all maximum cardinality matchings
|
||||||
|
@ -1057,7 +1281,14 @@ changing all weights by the same amount doesn't change which of these matchings
|
||||||
([link](https://dl.acm.org/doi/abs/10.5555/320176.320229))
|
([link](https://dl.acm.org/doi/abs/10.5555/320176.320229))
|
||||||
([pdf](https://dl.acm.org/doi/pdf/10.5555/320176.320229))
|
([pdf](https://dl.acm.org/doi/pdf/10.5555/320176.320229))
|
||||||
|
|
||||||
|
7. <a id="mehlhorn_schafer2002"></a>
|
||||||
|
Kurt Mehlhorn, Guido Schäfer, "Implementation of O(nm log(n)) Weighted Matchings in General Graphs: The Power of Data Structures", _Journal of Experimental Algorithmics vol. 7_, 2002.
|
||||||
|
([link](https://dl.acm.org/doi/10.1145/944618.944622))
|
||||||
|
|
||||||
|
8. <a id="aho_hopcroft_ullman1974"></a>
|
||||||
|
Alfred V. Aho, John E. Hopcroft, Jeffrey D. Ullman,
|
||||||
|
_The Design and Analysis of Computer Algorithms_, Addison-Wesley, 1974.
|
||||||
|
|
||||||
---
|
---
|
||||||
Written in 2023 by Joris van Rantwijk.
|
Written in 2023-2024 by Joris van Rantwijk.
|
||||||
This work is licensed under [CC BY-ND 4.0](https://creativecommons.org/licenses/by-nd/4.0/).
|
This work is licensed under [CC BY-ND 4.0](https://creativecommons.org/licenses/by-nd/4.0/).
|
||||||
|
|
|
@ -470,6 +470,9 @@ class NonTrivialBlossom(Blossom):
|
||||||
# The value of the dual variable changes through delta steps,
|
# The value of the dual variable changes through delta steps,
|
||||||
# but these changes are implemented as lazy updates.
|
# but these changes are implemented as lazy updates.
|
||||||
#
|
#
|
||||||
|
# blossom.dual_var holds the modified blossom dual value.
|
||||||
|
# The modified blossom dual is invariant under delta steps.
|
||||||
|
#
|
||||||
# The true dual value of a top-level S-blossom is
|
# The true dual value of a top-level S-blossom is
|
||||||
# blossom.dual_var + ctx.delta_sum_2x
|
# blossom.dual_var + ctx.delta_sum_2x
|
||||||
#
|
#
|
||||||
|
@ -479,7 +482,6 @@ class NonTrivialBlossom(Blossom):
|
||||||
# The true dual value of any other type of blossom is simply
|
# The true dual value of any other type of blossom is simply
|
||||||
# blossom.dual_var
|
# blossom.dual_var
|
||||||
#
|
#
|
||||||
# Note that "dual_var" is invariant under delta steps.
|
|
||||||
self.dual_var: float = 0
|
self.dual_var: float = 0
|
||||||
|
|
||||||
# If this is a top-level T-blossom,
|
# If this is a top-level T-blossom,
|
||||||
|
@ -575,6 +577,9 @@ class MatchingContext:
|
||||||
# The value of the dual variable changes through delta steps,
|
# The value of the dual variable changes through delta steps,
|
||||||
# but these changes are implemented as lazy updates.
|
# but these changes are implemented as lazy updates.
|
||||||
#
|
#
|
||||||
|
# vertex_dual_2x[x] holds 2 times the modified vertex dual value of
|
||||||
|
# vertex "x". The modified vertex dual is invariant under delta steps.
|
||||||
|
#
|
||||||
# The true dual value of an S-vertex is
|
# The true dual value of an S-vertex is
|
||||||
# (vertex_dual_2x[x] - delta_sum_2x) / 2
|
# (vertex_dual_2x[x] - delta_sum_2x) / 2
|
||||||
#
|
#
|
||||||
|
@ -584,7 +589,6 @@ class MatchingContext:
|
||||||
# The true dual value of an unlabeled vertex is
|
# The true dual value of an unlabeled vertex is
|
||||||
# (vertex_dual_2x[x] + B(x).vertex_dual_offset) / 2
|
# (vertex_dual_2x[x] + B(x).vertex_dual_offset) / 2
|
||||||
#
|
#
|
||||||
# Note that "vertex_dual_2x" is invariant under delta steps.
|
|
||||||
self.vertex_dual_2x: list[float]
|
self.vertex_dual_2x: list[float]
|
||||||
self.vertex_dual_2x = num_vertex * [self.start_vertex_dual_2x]
|
self.vertex_dual_2x = num_vertex * [self.start_vertex_dual_2x]
|
||||||
|
|
||||||
|
@ -648,14 +652,14 @@ class MatchingContext:
|
||||||
The pseudo-slack of an edge is related to its true slack, but
|
The pseudo-slack of an edge is related to its true slack, but
|
||||||
adjusted in a way that makes it invariant under delta steps.
|
adjusted in a way that makes it invariant under delta steps.
|
||||||
|
|
||||||
If the edge connects two S-vertices in different top-level blossoms,
|
The true slack of an edge between to S-vertices in different
|
||||||
the true slack is the pseudo-slack minus 2 times the running sum
|
top-level blossoms is
|
||||||
of delta steps.
|
edge_pseudo_slack_2x(e) / 2 - delta_sum_2x
|
||||||
|
|
||||||
If the edge connects an S-vertex to an unlabeled vertex,
|
The true slack of an edge between an S-vertex and an unlabeled
|
||||||
the true slack is the pseudo-slack minus the running sum of delta
|
vertex "y" inside top-level blossom B(y) is
|
||||||
steps, plus the pending offset of the top-level blossom that contains
|
(edge_pseudo_slack_2x(e)
|
||||||
the unlabeled vertex.
|
- delta_sum_2x + B(y).vertex_dual_offset) / 2
|
||||||
"""
|
"""
|
||||||
(x, y, w) = self.graph.edges[e]
|
(x, y, w) = self.graph.edges[e]
|
||||||
return self.vertex_dual_2x[x] + self.vertex_dual_2x[y] - 2 * w
|
return self.vertex_dual_2x[x] + self.vertex_dual_2x[y] - 2 * w
|
||||||
|
@ -1485,7 +1489,7 @@ class MatchingContext:
|
||||||
def augment_matching(self, path: AlternatingPath) -> None:
|
def augment_matching(self, path: AlternatingPath) -> None:
|
||||||
"""Augment the matching through the specified augmenting path.
|
"""Augment the matching through the specified augmenting path.
|
||||||
|
|
||||||
This function takes time O(n).
|
This function takes time O(n * log(n)).
|
||||||
"""
|
"""
|
||||||
|
|
||||||
# Check that the augmenting path starts and ends in
|
# Check that the augmenting path starts and ends in
|
||||||
|
|
Loading…
Reference in New Issue